// RESEARCH

Lam, W.-L. M., Gabernet, G., Poth, T., Sator-Schmitt, M., Oquendo, M. B., Kast, B., Lohr, S., de Ponti, A., Weiß, L., Schneider, M., Helm, D., Müller-Decker, K., Schirmacher, P., Heikenwälder, M., Klingmüller, U., Schneller, D., Geisler, F., Nahnsen, S., & Angel, P. (2025).

Springer Science and Business Media LLC.

Nikeleit, V., Maisch, M., Straub, D., Eroglu, S., Lopez-Rivoldi, J. C., Strauss, H., Ring-Hrubesh, F., Byrne, J. M., Kappler, A., & Bryce, C. (2025). 

In FEMS Microbiology Ecology. Oxford University Press (OUP)

Voggenreiter, E., ThomasArrigo, L., Bottaro, M., Kilian, J., Straub, D., Ring-Hrubesh, F., et al. (2025). 

Journal of Geophysical Research: Biogeosciences, 130, e2024JG008650.

Voggenreiter, E., Thomas Arrigo, L., Kilian, J., Straub, D., Friedel, M., Stahl, M., Kappler, A., & Joshi, P. (2025). 

Soil Biology and Biochemistry, 109735.

Fang, X., Colina Blanco, A. E., Christl, I., Le Bars, M., Straub, D., Kleindienst, S., Planer-Friedrich, B., Zhao, F.-J., Kappler, A., & Kretzschmar, R. (2024). 

In Environmental Pollution (Vol. 347, p. 123786). Elsevier BV.

Baláž, A., Gagie, T., Goga, A., Heumos, S., Navarro, G., Petescia, A., & Sirén, J. (2024).

In Lecture Notes in Computer Science (pp. 178–192). Springer Nature Switzerland.

Grimm, H., Drabesch, S., Nicol, A., Straub, D., Joshi, P., Zarfl, C., Planer-Friedrich, B., Muehe, E. M., & Kappler, A. (2024).

In Heliyon (Vol. 10, Issue 16, p. e35706). Elsevier BV.

Grimm, H., Lorenz, J., Straub, D., Joshi, P., Shuster, J., Zarfl, C., Muehe, E. M., & Kappler, A. (2024).

In A. Bose (Ed.), Applied and Environmental Microbiology. American Society for Microbiology

Haluska, A. A., Röhler, K., Fabregat‐Palau, J., Alexandrino, D. A. M., Abramov, S., Thompson, K. J., Straub, D., Kleindienst, S., Bugsel, B., Zweigle, J., Zwiener, C., & Grathwohl, P. (2024)

In Groundwater Monitoring & Remediation (Vol. 44, Issue 3, pp. 61–75). Wiley.

Hanssen, F., Garcia, M. U., Folkersen, L., Pedersen, A. S., Lescai, F., Jodoin, S., Miller, E., Seybold, M., Wacker, O., Smith, N., Gabernet, G., & Nahnsen, S. (2024)

In NAR Genomics and Bioinformatics (Vol. 6, Issue 2). Oxford University Press (OUP).

Heumos, S., Heuer, M. L., Hanssen, F., Heumos, L., Guarracino, A., Heringer, P., Ehmele, P., Prins, P., Garrison, E., & Nahnsen, S. (2024).

In C. Alkan (Ed.), Bioinformatics. Oxford University Press (OUP)

Jeyagaran, A., Urbanczyk, M., Carvajal‐Berrio, D., Baldissera, T., Kaiser, P. D., Kuhlburger, L., Czemmel, S., Nahnsen, S., Duffy, G. P., Brucker, S. Y., Layland, S. L., & Schenke‐Layland, K. (2024)

In Advanced Healthcare Materials. Wiley.

Kaldjob-Heinrich, L., Nuciforo, S., Lemke, S., Stahl, A., Czemmel, S., Babaei, S., Blukacz, L., Meier, M.-A., Zhang, Y., Schürch, C. M., Gonzalez-Menendez, I., Woelffing, P., Malek, N. P., Scheble, V., Nahnsen, S., Claassen, M., Templin, M., Bösmüller, H., Heim, M. H., … Bitzer, M. (2024).

In Gastro Hep Advances. Elsevier BV.

Langarica-Fuentes, A., Straub, D., Wimmer, B., Thompson, K., Nahnsen, S., Huhn, C., & Kleindienst, S. (2024).

In Applied Soil Ecology (Vol. 198, p. 105381). Elsevier BV.

Perelo, L. W., Gabernet, G., Straub, D., & Nahnsen, S. (2024).

In NAR Genomics and Bioinformatics (Vol. 6, Issue 1). Oxford University Press (OUP).

Vogel, A. L., Thompson, K. J., Straub, D., Musat, F., Gutierrez, T., & Kleindienst, S. (2024)

In FEMS Microbiology Ecology (Vol. 100, Issue 6). Oxford University Press (OUP).

Wanner, J., Kuhn Cuellar, L., Rausch, L., W. Berendzen, K., Wanke, F., Gabernet, G., Harter, K., & Nahnsen, S. (2024)

Quantitative Plant Biology, 5.

Aly, A., Laszlo, Z. I., Rajkumar, S., Demir, T., Hindley, N., Lamont, D. J., Lehmann, J., Seidel, M., Sommer, D., Franz-Wachtel, M., Barletta, F., Heumos, S., Czemmel, S., Kabashi, E., Ludolph, A., Boeckers, T. M., Henstridge, C. M., & Catanese, A. (2023)

Springer Science and Business Media LLC.

Begg, T. J. A., Schmidt, A., Kocher, A., Larmuseau, M. H. D., Runfeldt, G., Maier, P. A., Wilson, J. D., Barquera, R., Maj, C., Szolek, A., Sager, M., Clayton, S., Peltzer, A., Hui, R., Ronge, J., Reiter, E., Freund, C., Burri, M., Aron, F., … Krause, J. (2023)

In Current Biology. Elsevier BV

Chatziioannou, E., Roßner, J., Aung, T. N., Rimm, D. L., Niessner, H., Keim, U., Serna-Higuita, L. M., Bonzheim, I., Kuhn Cuellar, L., Westphal, D., Steininger, J., Meier, F., Pop, O. T., Forchhammer, S., Flatz, L., Eigentler, T., Garbe, C., Röcken, M., Amaral, T., & Sinnberg, T. (2023)

In eBioMedicine (Vol. 93, p. 104644). Elsevier BV.

Hakimzadeh, A., Abdala Asbun, A., Albanese, D., Bernard, M., Buchner, D., Callahan, B., Caporaso, J. G., Curd, E., Djemiel, C., Brandström Durling, M., Elbrecht, V., Gold, Z., Gweon, H. S., Hajibabaei, M., Hildebrand, F., Mikryukov, V., Normandeau, E., Özkurt, E., M. Palmer, J., … Anslan, S. (2023)

In Molecular Ecology Resources. Wiley.

Heumos, L., Ehmele, P., Kuhn Cuellar, L., Menden, K., Miller, E., Lemke, S., Gabernet, G., & Nahnsen, S. (2023)

In J. Wren (Ed.), Bioinformatics (Vol. 39, Issue 4). Oxford University Press (OUP).

Liao, W.-W., Asri, M., Ebler, J., Doerr, D., Haukness, M., Hickey, G., Lu, S., Lucas, J. K., Monlong, J., Abel, H. J., Buonaiuto, S., Chang, X. H., Cheng, H., Chu, J., Colonna, V., Eizenga, J. M., Feng, X., Fischer, C., Fulton, R. S., … Paten, B. (2023)

In Nature (Vol. 617, Issue 7960, pp. 312–324). Springer Science and Business Media LLC.

Lu, L., Rughöft, S., Straub, D., Joye, S. B., Kappler, A., & Kleindienst, S. (2023)

In Frontiers in Sustainable Cities (Vol. 5). Frontiers Media SA.

Siegel-Axel, D., Barroso Oquendo, M., Gerst, F., Fend, F., Wagner, R., Heni, M., Königsrainer, A., Häring, H.-U., Fritsche, A., Schleicher, E., Birkenfeld, A. L., & Stefan, N. (2023)

In International Journal of Molecular Sciences (Vol. 24, Issue 13, p. 11169). MDPI AG

Urbanczyk, M., Jeyagaran, A., Zbinden, A., Lu, C., Marzi, J., Kuhlburger, L., Nahnsen, S., Layland, S. L., Duffy, G., & Schenke-Layland, K. (2023)

In Matrix Biology (Vol. 115, pp. 160–183). Elsevier BV

Vogel, A. L., Thompson, K. J., Straub, D., App, C. B., Gutierrez, T., Löffler, F. E., & Kleindienst, S. (2023)

In Frontiers in Microbiology (Vol. 14). Frontiers Media SA

Antony, J. S., Daniel-Moreno, A., Lamsfus-Calle, A., Raju, J., Kaftancioglu, M., Ureña-Bailén, G., Rottenberger, J., Hou, Y., Santhanakumaran, V., Lee, J.-H., Heumos, L., Böhringer, J., Krägeloh-Mann, I., Handgretinger, R., & Mezger, M. (2022)

In The CRISPR Journal (Vol. 5, Issue 1, pp. 66–79). Mary Ann Liebert Inc.

Abramov, S. M., Straub, D., Tejada, J., Grimm, L., Schädler, F., Bulaev, A., Thorwarth, H., Amils, R., Kappler, A., & Kleindienst, S. (2022)

In J. D. Semrau (Ed.), Applied and Environmental Microbiology (Vol. 88, Issue 4). American Society for Microbiology.

Guarracino, A., Heumos, S., Nahnsen, S., Prins, P., & Garrison, E. (2022)

In P. Robinson (Ed.), Bioinformatics (Vol. 38, Issue 13, pp. 3319–3326). Oxford University Press (OUP).

Huang, Y.-M., Jakus, N., Straub, D., Konstantinidis, K. T., Blackwell, N., Kappler, A., & Kleindienst, S. (2022)

Systematic and Applied Microbiology, 45(3).

Khozooei, S., Lettau, K., Barletta, F., Jost, T., Rebholz, S., Veerappan, S., Franz-Wachtel, M., Macek, B., Iliakis, G., Distel, L. V., Zips, D., & Toulany, M. (2022).

In Journal of Experimental & Clinical Cancer Research (Vol. 41, Issue 1). Springer Science and Business Media LLC

Krakau, S., Straub, D., Gourlé, H., Gabernet, G., & Nahnsen, S. (2022)

NAR Genomics and Bioinformatics, 4(1).

Kuhn Cuellar, L., Friedrich, A., Gabernet, G., de la Garza, L., Fillinger, S., Seyboldt, A., Koch, T., zur Oven-Krockhaus, S., Wanke, F., Richter, S., Thaiss, W. M., Horger, M., Malek, N., Harter, K., Bitzer, M., & Nahnsen, S. (2022)

BMC Bioinformatics, 23(1).

Muehler, D., Mao, X., Czemmel, S., Geißert, J., Engesser, C., Hiller, K.-A., Widbiller, M., Maisch, T., Buchalla, W., Al-Ahmad, A., & Cieplik, F. (2022)

In Microorganisms (Vol. 10, Issue 3, p. 561)

Patzner, M. S., Kainz, N., Lundin, E., Barczok, M., Smith, C., Herndon, E., Kinsman-Costello, L., Fischer, S., Straub, D., Kleindienst, S., Kappler, A., & Bryce, C. (2022)

Environmental Science & Technology, 56(7), 4620–4631.

Patzner, M. S., Logan, M., McKenna, A. M., Young, R. B., Zhou, Z., Joss, H., Mueller, C. W., Hoeschen, C., Scholten, T., Straub, D., Kleindienst, S., Borch, T., Kappler, A., & Bryce, C. (2022)

Communications Earth & Environment, 3(1)

Sun, B., Bhati, K. K., Song, P., Edwards, A., Petri, L., Kruusvee, V., Blaakmeer, A., Dolde, U., Rodrigues, V., Straub, D., Yang, J., Jia, G., & Wenkel, S. (2022)

In C. Köhler (Ed.), PLOS Genetics (Vol. 18, Issue 9, p. e1010386). Public Library of Science (PLoS)

Van Le, A., Straub, D., Planer-Friedrich, B., Hug, S. J., Kleindienst, S., & Kappler, A. (2022).

In Science of The Total Environment (Vol. 838, p. 156496). Elsevier BV

Vasseur, F., Cornet, D., Beurier, G., Messier, J., Rouan, L., Bresson, J., Ecarnot, M., Stahl, M., Heumos, S., Gérard, M., Reijnen, H., Tillard, P., Lacombe, B., Emanuel, A., Floret, J., Estarague, A., Przybylska, S., Sartori, K., Gillespie, L. M., … Violle, C. (2022)

In Frontiers in Plant Science (Vol. 13). Frontiers Media SA

Cardona Gloria, Y., Bernhart, S. H., Fillinger, S., Wolz, O.-O., Dickhöfer, S., Admard, J., Ossowski, S., Nahnsen, S., Siebert, R., & Weber, A. N. R. (2021)

Frontiers in Immunology, 12

Fellows Yates, J. A., Lamnidis, T. C., Borry, M., Andrades Valtueña, A., Fagernäs, Z., Clayton, S., Garcia, M. U., Neukamm, J., & Peltzer, A. (2021).

PeerJ, 9, e10947

Gerst, F., Kemter, E., Lorza-Gil, E., Kaiser, G., Fritz, A.-K., Nano, R., Piemonti, L., Gauder, M., Dahl, A., Nadalin, S., Königsrainer, A., Fend, F., Birkenfeld, A. L., Wagner, R., Heni, M., Stefan, N., Wolf, E., Häring, H.-U., & Ullrich, S. (2021)

Diabetologia (Vol. 64, Issue 6, pp. 1358–1374). Springer Science and Business Media LLC.

Glodowska, M., Schneider, M., Eiche, E., Kontny, A., Neumann, T., Straub, D., Berg, M., Prommer, H., Bostick, B. C., Nghiem, A. A., Kleindienst, S., & Kappler, A. (2021)

Science of The Total Environment, 779, 146501

Glodowska, M., Schneider, M., Eiche, E., Kontny, A., Neumann, T., Straub, D., Kleindienst, S., & Kappler, A. (2021)

Environmental Pollution, 281, 117012

Huang, Y.-M., Straub, D., Blackwell, N., Kappler, A., & Kleindienst, S. (2021)

Applied and Environmental Microbiology (Vol. 87, Issue 15). American Society for Microbiology.

Huang, Y.-M., Straub, D., Kappler, A., Smith, N., Blackwell, N., & Kleindienst, S. (2021)

In Microbial Physiology (Vol. 31, Issue 3, pp. 280–295). S. Karger AG

Jakus, N., Blackwell, N., Osenbrück, K., Straub, D., Byrne, J. M., Wang, Z., Glöckler, D., Elsner, M., Lueders, T., Grathwohl, P., Kleindienst, S., & Kappler, A. (2021)

In A. J. M. Stams (Ed.), Applied and Environmental Microbiology (Vol. 87, Issue 16).

Jakus, N., Blackwell, N., Straub, D., Kappler, A., & Kleindienst, S. (2021)

Oxford University Press (OUP). https://doi.org/10.1093/femsec/fiab145

Krämer, B., Knoll, R., Bonaguro, L., ToVinh, M., Raabe, J., Astaburuaga-García, R., Schulte-Schrepping, J., Kaiser, K. M., Rieke, G. J., Bischoff, J., Monin, M. B., Hoffmeister, C., Schlabe, S., De Domenico, E., Reusch, N., Händler, K., Reynolds, G., Blüthgen, N., Hack, G., … Ziebuhr, J. (2021)

In Immunity (Vol. 54, Issue 11, pp. 2650-2669.e14). Elsevier BV

Pienkowska, A., Glodowska, M., Mansor, M., Buchner, D., Straub, D., Kleindienst, S., & Kappler, A. (2021)

In Environmental Science & Technology Letters (Vol. 8, Issue 9, pp. 832–837). American Chemical Society (ACS).

Singh, Y., Trautwein, C., Fendel, R., Krickeberg, N., Berezhnoy, G., Bissinger, R., Ossowski, S., Salker, M. S., Casadei, N., & Riess, O. (2021)

In Heliyon (Vol. 7, Issue 6, p. e07147). Elsevier BV

Warnat-Herresthal, S., Schultze, H., Shastry, K. L., Manamohan, S., Mukherjee, S., Garg, V., Sarveswara, R., Händler, K., Pickkers, P., Aziz, N. A., Ktena, S., Tran, F., Bitzer, M., Ossowski, S., Casadei, N., Herr, C., Petersheim, D., Behrends, U., Kern, F., … Schultze, J. L. (2021)

In Nature (Vol. 594, Issue 7862, pp. 265–270). Springer Science and Business Media LLC

Yang, Z., Sun, T., Kleindienst, S., Straub, D., Kretzschmar, R., Angenent, L. T., & Kappler, A. (2021).

In Soil Biology and Biochemistry (Vol. 163, p. 108446). Elsevier BV

Abramov, S. M., Tejada, J., Grimm, L., Schädler, F., Bulaev, A., Tomaszewski, E. J., Byrne, J. M., Straub, D., Thorwarth, H., Amils, R., Kleindienst, S., & Kappler, A. (2020).

In Science of The Total Environment (Vol. 718, p. 137294). Elsevier BV

Blackwell, N., Bryce, C., Straub, D., Kappler, A., & Kleindienst, S. (2020)

Applied and Environmental Microbiology (Vol. 86, Issue 17). American Society for Microbiology.

Botterweg-Paredes, E., Blaakmeer, A., Hong, S.-Y., Sun, B., Mineri, L., Kruusvee, V., Xie, Y., Straub, D., Ménard, D., Pesquet, E., & Wenkel, S. (2020)

In L.-J. Qu (Ed.), PLOS Genetics (Vol. 16, Issue 3, p. e1008678). Public Library of Science (PLoS)

Eizenga, J. M., Novak, A. M., Kobayashi, E., Villani, F., Cisar, C., Heumos, S., Hickey, G., Colonna, V., Paten, B., & Garrison, E. (2020)

In P. Robinson (Ed.), Bioinformatics (Vol. 36, Issue 21, pp. 5139–5144). Oxford University Press (OUP)

Eizenga, J. M., Novak, A. M., Sibbesen, J. A., Heumos, S., Ghaffaari, A., Hickey, G., Chang, X., Seaman, J. D., Rounthwaite, R., Ebler, J., Rautiainen, M., Garg, S., Paten, B., Marschall, T., Sirén, J., & Garrison, E. (2020)

In Annual Review of Genomics and Human Genetics (Vol. 21, Issue 1, pp. 139–162). Annual Reviews

Ewels, P. A., Peltzer, A., Fillinger, S., Patel, H., Alneberg, J., Wilm, A., Garcia, M. U., Di Tommaso, P., & Nahnsen, S. (2020)

In Nature Biotechnology (Vol. 38, Issue 3, pp. 276–278). Springer Science and Business Media LLC

Glodowska, M., Stopelli, E., Schneider, M., Lightfoot, A., Rathi, B., Straub, D., Patzner, M., Duyen, V. T., Berg, M., Kleindienst, S., & Kappler, A. (2020)

In Environmental Science & Technology (Vol. 54, Issue 7, pp. 4149–4159). American Chemical Society (ACS)

Glodowska, M., Stopelli, E., Schneider, M., Rathi, B., Straub, D., Lightfoot, A., Kipfer, R., Berg, M., Jetten, M., Kleindienst, S., Kappler, A., Glodowska, M., Kappler, A., Kleindienst, S., Cirpka, O. A., Rathi, B., Lightfoot, A., Stopelli, E., … Prommer, H. (2020)

In Communications Earth & Environment (Vol. 1, Issue 1). Springer Science and Business Media LLC

Glodowska, M., Stopelli, E., Straub, D., Vu Thi, D., Trang, P. T. K., Viet, P. H., AdvectAs team members, Berg, M., Kappler, A., & Kleindienst, S. (2020)

In Journal of Hazardous Materials (Vol. 407, p. 124398). Elsevier BV

Gugel, I., Ebner, F. H., Grimm, F., Czemmel, S., Paulsen, F., Hagel, C., Tatagiba, M., Nahnsen, S., & Tabatabai, G. (2020).

In Cancers (Vol. 12, Issue 1, p. 177). MDPI AG

Koch, M. S., Czemmel, S., Lennartz, F., Beyeler, S., Rajaraman, S., Przystal, J. M., Govindarajan, P., Canjuga, D., Neumann, M., Rizzu, P., Zwirner, S., Hoetker, M. S., Zender, L., Walter, B., Tatagiba, M., Raineteau, O., Heutink, P., Nahnsen, S., & Tabatabai, G. (2020).

In Neuro-Oncology Advances (Vol. 2, Issue 1). Oxford University Press (OUP).

Kumuthini, J., Chimenti, M., Nahnsen, S., Peltzer, A., Meraba, R., McFadyen, R., Wells, G., Taylor, D., Maienschein-Cline, M., Li, J.-L., Thimmapuram, J., Murthy-Karuturi, R., & Zass, L. (2020)

In F. Lewitter (Ed.), PLOS Computational Biology (Vol. 16, Issue 3, p. e1007531). Public Library of Science (PLoS).

Lamsfus-Calle, A., Daniel-Moreno, A., Antony, J. S., Epting, T., Heumos, L., Baskaran, P., Admard, J., Casadei, N., Latifi, N., Siegmund, D. M., Kormann, M. S. D., Handgretinger, R., & Mezger, M. (2020)

In Scientific Reports (Vol. 10, Issue 1). Springer Science and Business Media LLC.

Ostroumov, D., Duong, S., Wingerath, J., Woller, N., Manns, M. P., Timrott, K., Kleine, M., Ramackers, W., Roessler, S., Nahnsen, S., Czemmel, S., Dittrich‐Breiholz, O., Eggert, T., Kühnel, F., & Wirth, T. C. (2021)

In Hepatology (Vol. 73, Issue 4, pp. 1399–1418). Ovid Technologies (Wolters Kluwer Health)

Paguem, A., Abanda, B., Achukwi, M. D., Baskaran, P., Czemmel, S., Renz, A., & Eisenbarth, A. (2020)

In BMC Genetics (Vol. 21, Issue 1). Springer Science and Business Media LLC

Ruschil, C., Gabernet, G., Lepennetier, G., Heumos, S., Kaminski, M., Hracsko, Z., Irmler, M., Beckers, J., Ziemann, U., Nahnsen, S., Owens, G. P., Bennett, J. L., Hemmer, B., & Kowarik, M. C. (2020)

In Frontiers in Immunology (Vol. 11). Frontiers Media SA

Straub, D., Blackwell, N., Langarica-Fuentes, A., Peltzer, A., Nahnsen, S., & Kleindienst, S. (2020)

In Frontiers in Microbiology (Vol. 11). Frontiers Media SA

Benitz, S., Straub, T., Mahajan, U. M., Mutter, J., Czemmel, S., Unruh, T., Wingerath, B., Deubler, S., Fahr, L., Cheng, T., Nahnsen, S., Bruns, P., Kong, B., Raulefs, S., Ceyhan, G. O., Mayerle, J., Steiger, K., Esposito, I., Kleeff, J., … Regel, I. (2019)

In Gut (Vol. 68, Issue 11, pp. 2007–2018). BMJ.

Bichmann, L., Nelde, A., Ghosh, M., Heumos, L., Mohr, C., Peltzer, A., Kuchenbecker, L., Sachsenberg, T., Walz, J. S., Stevanović, S., Rammensee, H.-G., & Kohlbacher, O. (2019)

In Journal of Proteome Research (Vol. 18, Issue 11, pp. 3876–3884). American Chemical Society (ACS)

Bilich, T., Nelde, A., Bichmann, L., Roerden, M., Salih, H. R., Kowalewski, D. J., Schuster, H., Tsou, C.-C., Marcu, A., Neidert, M. C., Lübke, M., Rieth, J., Schemionek, M., Brümmendorf, T. H., Vucinic, V., Niederwieser, D., Bauer, J., Märklin, M., Peper, J. K., … Walz, J. S. (2019)

In Blood (Vol. 133, Issue 6, pp. 550–565). American Society of Hematology

Blaeschke, F., Paul, M. C., Schuhmann, M. U., Rabsteyn, A., Schroeder, C., Casadei, N., Matthes, J., Mohr, C., Lotfi, R., Wagner, B., Kaeuferle, T., Feucht, J., Willier, S., Handgretinger, R., StevanoviĆ, S., Lang, P., & Feuchtinger, T. (2019)

In Cytotherapy (Vol. 21, Issue 9, pp. 973–986). Elsevier BV.

Bryce, C., Blackwell, N., Straub, D., Kleindienst, S., & Kappler, A. (2019)

Microbiology Resource Announcements, 8(18)

Cain, N., Alka, O., Segelke, T., von Wuthenau, K., Kohlbacher, O., & Fischer, M. (2019)

In Food Chemistry (Vol. 298, p. 125013). Elsevier BV

Eisenmann, B., Czemmel, S., Ziegler, T., Buchholz, G., Kortekamp, A., Trapp, O., Rausch, T., Dry, I., & Bogs, J. (2019)

In BMC Plant Biology (Vol. 19, Issue 1). Springer Science and Business Media LLC

Fillinger, S., de la Garza, L., Peltzer, A., Kohlbacher, O., & Nahnsen, S. (2019)

In Analytical and Bioanalytical Chemistry (Vol. 411, Issue 26, pp. 6791–6800). Springer Science and Business Media LLC

Herster, F., Bittner, Z., Codrea, M. C., Archer, N. K., Heister, M., Löffler, M. W., Heumos, S., Wegner, J., Businger, R., Schindler, M., Stegner, D., Schäkel, K., Grabbe, S., Ghoreschi, K., Miller, L. S., & Weber, A. N. R. (2019)

In Frontiers in Immunology (Vol. 10). Frontiers Media SA

Kersten, E., Dammeier, S., Ajana, S., Groenewoud, J. M. M., Codrea, M., Klose, F., Lechanteur, Y. T., Fauser, S., Ueffing, M., Delcourt, C., Hoyng, C. B., de Jong, E. K., & den Hollander, A. I. (2019)

In A. S. Lewin (Ed.), PLOS ONE (Vol. 14, Issue 6, p. e0218457). Public Library of Science (PLoS)

Löffler, M. W., Mohr, C., Bichmann, L., Freudenmann, L. K., Walzer, M., Schroeder, C. M., Trautwein, N., Hilke, F. J., Zinser, R. S., Mühlenbruch, L., Kowalewski, D. J., Schuster, H., Sturm, M., Matthes, J., Riess, O., Czemmel, S., Nahnsen, S., Königsrainer, I., … Rammensee, H.-G. (2019)

In Genome Medicine (Vol. 11, Issue 1). Springer Science and Business Media LLC

Miess, H., Arlt, P., Apel, A. K., Weber, T., Nieselt, K., Hanssen, F., Czemmel, S., Nahnsen, S., & Gross, H. (2019)

In D. Rasko (Ed.), Microbiology Resource Announcements (Vol. 8, Issue 45). American Society for Microbiology

Rajaraman, S., Canjuga, D., Ghosh, M., Codrea, M. C., Sieger, R., Wedekink, F., Tatagiba, M., Koch, M., Lauer, U. M., Nahnsen, S., Rammensee, H.-G., Mühlebach, M. D., Stevanovic, S., & Tabatabai, G. (2019)

In Molecular Therapy – Oncolytics (Vol. 12, pp. 147–161). Elsevier BV.

Richardson, J. R., Armbruster, N. S., Günter, M., Biljecki, M., Klenk, J., Heumos, S., & Autenrieth, S. E. (2019)

In Frontiers in Immunology (Vol. 10). Frontiers Media SA.

Schneider, L., Kehl, T., Thedinga, K., Grammes, N. L., Backes, C., Mohr, C., Schubert, B., Lenhof, K., Gerstner, N., Hartkopf, A. D., Wallwiener, M., Kohlbacher, O., Keller, A., Meese, E., Graf, N., & Lenhof, H.-P. (2019)

In R. Schwartz (Ed.), Bioinformatics (Vol. 35, Issue 24, pp. 5171–5181). Oxford University Press (OUP)

Friedrich, A., de la Garza, L., Kohlbacher, O., & Nahnsen, S. (2018)

In Lecture Notes in Computer Science (pp. 75–84). Springer International Publishing

Antony, J. S., Latifi, N., Haque, A. K. M. A., Lamsfus-Calle, A., Daniel-Moreno, A., Graeter, S., Baskaran, P., Weinmann, P., Mezger, M., Handgretinger, R., & Kormann, M. S. D. (2018)

In Molecular and Cellular Pediatrics (Vol. 5, Issue 1). Springer Science and Business Media LLC

Apweiler, R., Beissbarth, T., Berthold, M. R., Blüthgen, N., Burmeister, Y., Dammann, O., Deutsch, A., Feuerhake, F., Franke, A., Hasenauer, J., Hoffmann, S., Höfer, T., Jansen, P. L., Kaderali, L., Klingmüller, U., Koch, I., Kohlbacher, O., Kuepfer, L., Lammert, F., … Wolkenhauer, O. (2018)

In Experimental & Molecular Medicine (Vol. 50, Issue 3, pp. e453–e453). Springer Science and Business Media LLC

Benitz, S., Mahajan, U. M., Czemmel, S., Nahnsen, S., Ceyhan, G., Mayerle, J., Michalski, C. W., Kleeff, J., & Regel, I. (2018)

In Pancreatology (Vol. 18, Issue 4, p. S92). Elsevier BV

Domingo-Calap, P., Schubert, B., Joly, M., Solis, M., Untrau, M., Carapito, R., Georgel, P., Caillard, S., Fafi-Kremer, S., Paul, N., Kohlbacher, O., González-Candelas, F., & Bahram, S. (2018)

In M. Vignuzzi (Ed.), PLOS Pathogens (Vol. 14, Issue 10, p. e1007368). Public Library of Science (PLoS)

Fröhlich, H., Balling, R., Beerenwinkel, N., Kohlbacher, O., Kumar, S., Lengauer, T., Maathuis, M. H., Moreau, Y., Murphy, S. A., Przytycka, T. M., Rebhan, M., Röst, H., Schuppert, A., Schwab, M., Spang, R., Stekhoven, D., Sun, J., Weber, A., Ziemek, D., & Zupan, B. (2018)

In BMC Medicine (Vol. 16, Issue 1). Springer Science and Business Media LLC

Kahles, A., Lehmann, K.-V., Toussaint, N. C., Hüser, M., Stark, S. G., Sachsenberg, T., Stegle, O., Kohlbacher, O., Sander, C., Rätsch, G., Caesar-Johnson, S. J., Demchok, J. A., Felau, I., Kasapi, M., Ferguson, M. L., Hutter, C. M., Sofia, H. J., Tarnuzzer, R., Wang, Z., … Mariamidze, A. (2018)

In Cancer Cell (Vol. 34, Issue 2, pp. 211-224.e6). Elsevier BV

Kaur, G., & Pati, P. K. (2018)

In BMC Plant Biology (Vol. 18, Issue 1). Springer Science and Business Media LLC.

Korkmaz, A. G., Popov, T., Peisl, L., Codrea, M. C., Nahnsen, S., Steimle, A., Velic, A., Macek, B., von Bergen, M., Bernhardt, J., & Frick, J.-S. (2018)

In Journal of Proteomics (Vol. 180, pp. 11–24). Elsevier BV..

Löffler, M. W., Kowalewski, D. J., Backert, L., Bernhardt, J., Adam, P., Schuster, H., Dengler, F., Backes, D., Kopp, H.-G., Beckert, S., Wagner, S., Königsrainer, I., Kohlbacher, O., Kanz, L., Königsrainer, A., Rammensee, H.-G., Stevanović, S., & Haen, S. P. (2018)

In Cancer Research (Vol. 78, Issue 16, pp. 4627–4641). American Association for Cancer Research (AACR)

Mohr, C., Friedrich, A., Wojnar, D., Kenar, E., Polatkan, A. C., Codrea, M. C., Czemmel, S., Kohlbacher, O., & Nahnsen, S. (2018)

In F. Lisacek (Ed.), PLOS ONE (Vol. 13, Issue 1, p. e0191603). Public Library of Science (PLoS)

Nelde, A., Kowalewski, D. J., Backert, L., Schuster, H., Werner, J.-O., Klein, R., Kohlbacher, O., Kanz, L., Salih, H. R., Rammensee, H.-G., Stevanović, S., & Walz, J. S. (2018)

In OncoImmunology (Vol. 7, Issue 4). Informa UK Limited

Schubert, B., Schärfe, C., Dönnes, P., Hopf, T., Marks, D., & Kohlbacher, O. (2018)

In R. L. Dunbrack (Ed.), PLOS Computational Biology (Vol. 14, Issue 3, p. e1005983). Public Library of Science (PLoS)

van de Poel, S., Dreer, M., Velic, A., Macek, B., Baskaran, P., Iftner, T., & Stubenrauch, F. (2018)

In L. Banks (Ed.), Journal of Virology (Vol. 92, Issue 4). American Society for Microbiology

Walz, J. S., Kowalewski, D. J., Backert, L., Nelde, A., Kohlbacher, O., Weide, B., Kanz, L., Salih, H. R., Rammensee, H.-G., & Stevanović, S. (2018)

In Leukemia & Lymphoma (Vol. 59, Issue 8, pp. 1949–1958). Informa UK Limited

D’Alvise, P., Böhme, F., Codrea, M. C., Seitz, A., Nahnsen, S., Binzer, M., Rosenkranz, P., & Hasselmann, M. (2017)

In Apidologie (Vol. 49, Issue 2, pp. 252–264). Springer Science and Business Media LLC

Armeanu-Ebinger, S., Hadaschik, D., Kyzirakos, C., Mohr, C., Battke, F., Kohlbacher, O., Nahnsen, S., & Biskup, S. (2017)

In Annals of Oncology (Vol. 28, p. vii12). Elsevier BV

Audain, E., Uszkoreit, J., Sachsenberg, T., Pfeuffer, J., Liang, X., Hermjakob, H., Sanchez, A., Eisenacher, M., Reinert, K., Tabb, D. L., Kohlbacher, O., & Perez-Riverol, Y. (2017)

In Journal of Proteomics (Vol. 150, pp. 170–182). Elsevier BV

Backert, L., Kowalewski, D. J., Walz, S., Schuster, H., Berlin, C., Neidert, M. C., Schemionek, M., Brümmendorf, T. H., Vucinic, V., Niederwieser, D., Kanz, L., Salih, H. R., Kohlbacher, O., Weisel, K., Rammensee, H.-G., Stevanović, S., & Walz, J. S. (2017)

In Oncotarget (Vol. 8, Issue 27, pp. 43915–43924). Impact Journals, LLC

Chevrette, M. G., Aicheler, F., Kohlbacher, O., Currie, C. R., & Medema, M. H. (2017)

In I. Birol (Ed.), Bioinformatics (Vol. 33, Issue 20, pp. 3202–3210). Oxford University Press (OUP)

Czemmel, S., Höll, J., Loyola, R., Arce-Johnson, P., Alcalde, J. A., Matus, J. T., & Bogs, J. (2017)

In Frontiers in Plant Science (Vol. 8). Frontiers Media SA

Dittmann, K., Mayer, C., Czemmel, S., Huber, S. M., & Rodemann, H. P. (2017)

In C. J. Wilusz (Ed.), PLOS ONE (Vol. 12, Issue 12, p. e0189087). Public Library of Science (PLoS)

Fellows Yates, J. A., Drucker, D. G., Reiter, E., Heumos, S., Welker, F., Münzel, S. C., Wojtal, P., Lázničková-Galetová, M., Conard, N. J., Herbig, A., Bocherens, H., & Krause, J. (2017)

In Scientific Reports (Vol. 7, Issue 1). Springer Science and Business Media LLC

Flett, F. J., Sachsenberg, T., Kohlbacher, O., Mackay, C. L., & Interthal, H. (2017)

In Analytical Chemistry (Vol. 89, Issue 21, pp. 11208–11213). American Chemical Society (ACS)

Löffler, M. W., Chandran, P. A., Laske, K., Schroeder, C., Bonzheim, I., Walzer, M., Hilke, F. J., Trautwein, N., Kowalewski, D. J., Schuster, H., Günder, M., Carcamo Yañez, V. A., Mohr, C., Sturm, M., Nguyen, H.-P., Riess, O., Bauer, P., Nahnsen, S., Nadalin, S., … Rammensee, H.-G. (2017)

In Journal of Hepatology (Vol. 66, Issue 1, pp. 252–253). Elsevier BV

Schärfe, C. P. I., Tremmel, R., Schwab, M., Kohlbacher, O., & Marks, D. S. (2017)

In Genome Medicine (Vol. 9, Issue 1). Springer Science and Business Media LLC

Schubert, B., de la Garza, L., Mohr, C., Walzer, M., & Kohlbacher, O. (2017)

In BMC Bioinformatics (Vol. 18, Issue 1). Springer Science and Business Media LLC

Schuster, H., Peper, J. K., Bösmüller, H.-C., Röhle, K., Backert, L., Bilich, T., Ney, B., Löffler, M. W., Kowalewski, D. J., Trautwein, N., Rabsteyn, A., Engler, T., Braun, S., Haen, S. P., Walz, J. S., Schmid-Horch, B., Brucker, S. Y., Wallwiener, D., Kohlbacher, O., … Wagner, P. (2017)

In Proceedings of the National Academy of Sciences (Vol. 114, Issue 46). Proceedings of the National Academy of Sciences

Vizcaíno, J. A., Walzer, M., Jiménez, R. C., Bittremieux, W., Bouyssié, D., Carapito, C., Corrales, F., Ferro, M., Heck, A. J. R., Horvatovich, P., Hubalek, M., Lane, L., Laukens, K., Levander, F., Lisacek, F., Novak, P., Palmblad, M., Piovesan, D., Pühler, A., … Kohlbacher, O. (2017)

In F1000Research (Vol. 6, p. 875). F1000 Research Ltd

Vizcaíno, J. A., Mayer, G., Perkins, S., Barsnes, H., Vaudel, M., Perez-Riverol, Y., Ternent, T., Uszkoreit, J., Eisenacher, M., Fischer, L., Rappsilber, J., Netz, E., Walzer, M., Kohlbacher, O., Leitner, A., Chalkley, R. J., Ghali, F., Martínez-Bartolomé, S., Deutsch, E. W., & Jones, A. R. (2017)

In Molecular & Cellular Proteomics (Vol. 16, Issue 7, pp. 1275–1285). Elsevier BV

Breckels, L. M., Holden, S. B., Wojnar, D., Mulvey, C. M., Christoforou, A., Groen, A., Trotter, M. W. B., Kohlbacher, O., Lilley, K. S., & Gatto, L. (2016)

In T. Dandekar (Ed.), PLOS Computational Biology (Vol. 12, Issue 5, p. e1004920). Public Library of Science (PLoS)

Codrea, M. C., & Nahnsen, S. (2016)

In Advances in Experimental Medicine and Biology (pp. 203–215). Springer International Publishing

Griss, J., Perez-Riverol, Y., Lewis, S., Tabb, D. L., Dianes, J. A., del-Toro, N., Rurik, M., Walzer, M., Kohlbacher, O., Hermjakob, H., Wang, R., & Vizcaíno, J. A. (2016)

In Nature Methods (Vol. 13, Issue 8, pp. 651–656). Springer Science and Business Media LLC

Hesselager, M. O., Codrea, M. C., Sun, Z., Deutsch, E. W., Bennike, T. B., Stensballe, A., Bundgaard, L., Moritz, R. L., & Bendixen, E. (2016)

In PROTEOMICS (Vol. 16, Issue 4, pp. 634–644). Wiley

Hong, H. S., Koch, S. D., Scheel, B., Gnad-Vogt, U., Schröder, A., Kallen, K.-J., Wiegand, V., Backert, L., Kohlbacher, O., Hoerr, I., Fotin-Mleczek, M., & Billingsley, J. M. (2016)

In OncoImmunology (Vol. 5, Issue 12, p. e1249560). Informa UK Limited

Kohlbacher, O., Vitek, O., & Weintraub, S. T. (2016)

In Journal of Proteome Research (Vol. 15, Issue 3, pp. 681–682). American Chemical Society (ACS)

Kowalewski, D. J., Walz, S., Backert, L., Schuster, H., Kohlbacher, O., Weisel, K., Rittig, S. M., Kanz, L., Salih, H. R., Rammensee, H.-G., Stevanović, S., & Stickel, J. S. (2016)

In Blood Cancer Journal (Vol. 6, Issue 4, pp. e411–e411). Springer Science and Business Media LLC

Kyzirakos, C., Mohr, C., Armeanu-Ebinger, S., Feldhahn, M., Hadaschik, D., Walzer, M., Döcker, D., Menzel, M., Nahnsen, S., Kohlbacher, O., & Biskup, S. (2016)

In Annals of Oncology (Vol. 27, p. vi375). Elsevier BV

Löffler, M. W., Chandran, P. A., Laske, K., Schroeder, C., Bonzheim, I., Walzer, M., Hilke, F. J., Trautwein, N., Kowalewski, D. J., Schuster, H., Günder, M., Carcamo Yañez, V. A., Mohr, C., Sturm, M., Nguyen, H.-P., Riess, O., Bauer, P., Nahnsen, S., Nadalin, S., … Rammensee, H.-G. (2016)

In Journal of Hepatology (Vol. 65, Issue 4, pp. 849–855). Elsevier BV

Loyola, R., Herrera, D., Mas, A., Wong, D. C. J., Höll, J., Cavallini, E., Amato, A., Azuma, A., Ziegler, T., Aquea, F., Castellarin, S. D., Bogs, J., Tornielli, G. B., Peña-Neira, A., Czemmel, S., Alcalde, J. A., Matus, J. T., & Arce-Johnson, P. (2016)

In Journal of Experimental Botany (Vol. 67, Issue 18, pp. 5429–5445). Oxford University Press (OUP)

Mueller, S. C., Backes, C., Gress, A., Baumgarten, N., Kalinina, O. V., Moll, A., Kohlbacher, O., Meese, E., & Keller, A. (2016)

In Bioinformatics (Vol. 32, Issue 12, pp. 1888–1890). Oxford University Press (OUP)

Rabsteyn, A., Kyzirakos, C., Schröder, C., Sturm, M., Mohr, C., Walzer, M., Pflückhahn, U., Walter, M., Feldhahn, M., Laske, K., Bonin, M., Ebinger, M., Stevanovic, S., Bauer, P., Kohlbacher, O., Gouttefangeas, C., Rammensee, H.-G., Handgretinger, R., & Lang, P. (2016)

In Cancer Immunology Research (Vol. 4, Issue 1_Supplement, pp. A113–A113). American Association for Cancer Research (AACR)

Ranninger, C., Schmidt, L. E., Rurik, M., Limonciel, A., Jennings, P., Kohlbacher, O., & Huber, C. G. (2016)

In Analytica Chimica Acta (Vol. 930, pp. 13–22). Elsevier BV

Röst, H. L., Sachsenberg, T., Aiche, S., Bielow, C., Weisser, H., Aicheler, F., Andreotti, S., Ehrlich, H.-C., Gutenbrunner, P., Kenar, E., Liang, X., Nahnsen, S., Nilse, L., Pfeuffer, J., Rosenberger, G., Rurik, M., Schmitt, U., Veit, J., Walzer, M., … Kohlbacher, O. (2016)

In Nature Methods (Vol. 13, Issue 9, pp. 741–748). Springer Science and Business Media LLC

Schubert, B., Walzer, M., Brachvogel, H.-P., Szolek, A., Mohr, C., & Kohlbacher, O. (2016)

In Bioinformatics (Vol. 32, Issue 13, pp. 2044–2046). Oxford University Press (OUP)

Schubert, B., & Kohlbacher, O. (2016)

In Genome Medicine (Vol. 8, Issue 1). Springer Science and Business Media LLC

Sinnberg, T., Makino, E., Krueger, M. A., Velic, A., Macek, B., Rothbauer, U., Groll, N., Pötz, O., Czemmel, S., Niessner, H., Meier, F., Ikenberg, K., Garbe, C., & Schittek, B. (2016)

In EBioMedicine (Vol. 8, pp. 132–149). Elsevier BV

Veit, J., Sachsenberg, T., Chernev, A., Aicheler, F., Urlaub, H., & Kohlbacher, O. (2016)

In Journal of Proteome Research (Vol. 15, Issue 9, pp. 3441–3448). American Chemical Society (ACS)

Gatto, L., Hansen, K. D., Hoopmann, M. R., Hermjakob, H., Kohlbacher, O., & Beyer, A. (2015)

In Journal of Proteome Research (Vol. 15, Issue 3, pp. 809–814). American Chemical Society (ACS)

Dammeier, S., Nahnsen, S., Veit, J., Wehner, F., Ueffing, M., & Kohlbacher, O. (2015)

In Journal of Proteome Research (Vol. 15, Issue 1, pp. 182–192). American Chemical Society (ACS)

Boyles, M. S. P., Ranninger, C., Reischl, R., Rurik, M., Tessadri, R., Kohlbacher, O., Duschl, A., & Huber, C. G. (2015)

In Particle and Fibre Toxicology (Vol. 13, Issue 1). Springer Science and Business Media LLC

Aicheler, F., Li, J., Hoene, M., Lehmann, R., Xu, G., & Kohlbacher, O. (2015)

In Analytical Chemistry (Vol. 87, Issue 15, pp. 7698–7704). American Chemical Society (ACS)

Backert, L., & Kohlbacher, O. (2015)

In Genome Medicine (Vol. 7, Issue 1). Springer Science and Business Media LLC.

Friedrich, A., Kenar, E., Kohlbacher, O., & Nahnsen, S. (2015)

In BioMed Research International (Vol. 2015, pp. 1–8). Wiley.

Hesselager, M. O., Codrea, M. C., & Bendixen, E. (2015)

In PROTEOMICS (Vol. 15, Issue 13, pp. 2350–2357). Wiley.

Martens, L., Kohlbacher, O., & Weintraub, S. T. (2015)

In Journal of Proteome Research (Vol. 14, Issue 5, pp. 2002–2004). American Chemical Society (ACS)

Proikas-Cezanne, T., Takacs, Z., Dönnes, P., & Kohlbacher, O. (2015)

In Journal of Cell Science. The Company of Biologists

Ranninger, C., Rurik, M., Limonciel, A., Ruzek, S., Reischl, R., Wilmes, A., Jennings, P., Hewitt, P., Dekant, W., Kohlbacher, O., & Huber, C. G. (2015)

In Journal of Biological Chemistry (Vol. 290, Issue 31, pp. 19121–19132). Elsevier BV

Schubert, B., Brachvogel, H.-P., Jürges, C., & Kohlbacher, O. (2015)

In Bioinformatics (Vol. 31, Issue 13, pp. 2211–2213). Oxford University Press (OUP)

Sharma, K., Hrle, A., Kramer, K., Sachsenberg, T., Staals, R. H. J., Randau, L., Marchfelder, A., van der Oost, J., Kohlbacher, O., Conti, E., & Urlaub, H. (2015)

In Methods (Vol. 89, pp. 138–148). Elsevier BV.

Thost, A.-K., Dönnes, P., Kohlbacher, O., & Proikas-Cezanne, T. (2015)

In Methods (Vol. 75, pp. 69–78). Elsevier BV.

Ziller, M. J., Edri, R., Yaffe, Y., Donaghey, J., Pop, R., Mallard, W., Issner, R., Gifford, C. A., Goren, A., Xing, J., Gu, H., Cacchiarelli, D., Tsankov, A. M., Epstein, C., Rinn, J. L., Mikkelsen, T. S., Kohlbacher, O., Gnirke, A., Bernstein, B. E., … Meissner, A. (2014)

In Nature (Vol. 518, Issue 7539, pp. 355–359). Springer Science and Business Media LLC.

Sachsenberg, T., Herbst, F.-A., Taubert, M., Kermer, R., Jehmlich, N., von Bergen, M., Seifert, J., & Kohlbacher, O. (2014)

In Journal of Proteome Research (Vol. 14, Issue 2, pp. 619–627). American Chemical Society (ACS)

Hildebrandt, A. K., Stöckel, D., Fischer, N. M., de la Garza, L., Krüger, J., Nickels, S., Röttig, M., Schärfe, C., Schumann, M., Thiel, P., Lenhof, H.-P., Kohlbacher, O., & Hildebrandt, A. (2014)

In Bioinformatics (Vol. 31, Issue 1, pp. 121–122). Oxford University Press (OUP)

Gerasch, A., Faber, D., Küntzer, J., Niermann, P., Kohlbacher, O., Lenhof, H.-P., & Kaufmann, M. (2014)

In A. Porollo (Ed.), PLoS ONE (Vol. 9, Issue 2, p. e87397). Public Library of Science (PLoS)

Gofman, Y., Schärfe, C., Marks, D. S., Haliloglu, T., & Ben-Tal, N. (2014)

In M. Nilges (Ed.), PLoS Computational Biology (Vol. 10, Issue 12, p. e1003976). Public Library of Science (PLoS)

Griss, J., Jones, A. R., Sachsenberg, T., Walzer, M., Gatto, L., Hartler, J., Thallinger, G. G., Salek, R. M., Steinbeck, C., Neuhauser, N., Cox, J., Neumann, S., Fan, J., Reisinger, F., Xu, Q.-W., del Toro, N., Pérez-Riverol, Y., Ghali, F., Bandeira, N., … Hermjakob, H. (2014)

In Molecular & Cellular Proteomics (Vol. 13, Issue 10, pp. 2765–2775). Elsevier BV

Hopf, T. A., Schärfe, C. P. I., Rodrigues, J. P. G. L. M., Green, A. G., Kohlbacher, O., Sander, C., Bonvin, A. M. J. J., & Marks, D. S. (2014)

In eLife (Vol. 3). eLife Sciences Publications, Ltd

Jordan, E., Roosen-Runge, F., Leibfarth, S., Zhang, F., Sztucki, M., Hildebrandt, A., Kohlbacher, O., & Schreiber, F. (2014)

In The Journal of Physical Chemistry B (Vol. 118, Issue 38, pp. 11365–11374). American Chemical Society (ACS)

Kenar, E., Franken, H., Forcisi, S., Wörmann, K., Häring, H.-U., Lehmann, R., Schmitt-Kopplin, P., Zell, A., & Kohlbacher, O. (2014)

In Molecular & Cellular Proteomics (Vol. 13, Issue 1, pp. 348–359). Elsevier BV

Kramer, K., Sachsenberg, T., Beckmann, B. M., Qamar, S., Boon, K.-L., Hentze, M. W., Kohlbacher, O., & Urlaub, H. (2014)

In Nature Methods (Vol. 11, Issue 10, pp. 1064–1070). Springer Science and Business Media LLC

Krüger, J., Grunzke, R., Herres-Pawlis, S., Hoffmann, A., de la Garza, L., Kohlbacher, O., Nagel, W. E., & Gesing, S. (2014)

In BioMed Research International (Vol. 2014, pp. 1–7). Wiley

Olabarriaga, S. D., Benabdelkader, A., Caan, M. W. A., Jaghoori, M. M., Krüger, J., de la Garza, L., Mohr, C., Schubert, B., Danezi, A., & Kiss, T. (2014)

In Science Gateways for Distributed Computing Infrastructures (pp. 223–234). Springer International Publishing

Restelli, L., Codrea, M. C., Savoini, G., Ceciliani, F., & Bendixen, E. (2014)

In Journal of Proteomics (Vol. 108, pp. 295–305). Elsevier BV

Szolek, A., Schubert, B., Mohr, C., Sturm, M., Feldhahn, M., & Kohlbacher, O. (2014)

In Bioinformatics (Vol. 30, Issue 23, pp. 3310–3316). Oxford University Press (OUP)

Thiel, P., Sach-Peltason, L., Ottmann, C., & Kohlbacher, O. (2014)

In Journal of Chemical Information and Modeling (Vol. 54, Issue 9, pp. 2395–2401). American Chemical Society (ACS)

Wagner, R., Li, J., Kenar, E., Kohlbacher, O., Machicao, F., Häring, H.-U., Fritsche, A., Xu, G., & Lehmann, R. (2014)

In Scientific Reports (Vol. 4, Issue 1). Springer Science and Business Media LLC

Walzer, M., Pernas, L. E., Nasso, S., Bittremieux, W., Nahnsen, S., Kelchtermans, P., Pichler, P., van den Toorn, H. W. P., Staes, A., Vandenbussche, J., Mazanek, M., Taus, T., Scheltema, R. A., Kelstrup, C. D., Gatto, L., van Breukelen, B., Aiche, S., Valkenborg, D., Laukens, K., … Martens, L. (2014)

In Molecular & Cellular Proteomics (Vol. 13, Issue 8, pp. 1905–1913). Elsevier BV

Brand, L. H., Fischer, N. M., Harter, K., Kohlbacher, O., & Wanke, D. (2013)

In Nucleic Acids Research (Vol. 41, Issue 21, pp. 9764–9778). Oxford University Press (OUP)

Gifford, C. A., Ziller, M. J., Gu, H., Trapnell, C., Donaghey, J., Tsankov, A., Shalek, A. K., Kelley, D. R., Shishkin, A. A., Issner, R., Zhang, X., Coyne, M., Fostel, J. L., Holmes, L., Meldrim, J., Guttman, M., Epstein, C., Park, H., Kohlbacher, O., … Meissner, A. (2013)

In Cell (Vol. 153, Issue 5, pp. 1149–1163). Elsevier BV

Kyzirakos, C.; Pflueckhahn, U.; Sturm, M.; Schroeder, C.; Bauer, P.; Walter, M.; Feldhahn, M.; Walzer, M.; Mohr, C.; Szolek, A.; Bonin, M.; Kohlbacher, Oliver; Ebinger, M.; Handgretinger, Rupert; Rammensee, Hans-Georg; Land, P.

Bone Marrow Transplant. (2013), Bd. 48, H. 3, S. 401

Nahnsen, S., Bielow, C., Reinert, K., & Kohlbacher, O. (2013)

In Molecular & Cellular Proteomics (Vol. 12, Issue 3, pp. 549–556). Elsevier BV

Nahnsen, S., Sachsenberg, T., & Kohlbacher, O. (2013)

In PROTEOMICS (Vol. 13, Issue 6, pp. 1042–1051). Wiley.

Perez-Riverol, Y., Hermjakob, H., Kohlbacher, O., Martens, L., Creasy, D., Cox, J., Leprevost, F., Shan, B. P., Pérez-Nueno, V. I., Blazejczyk, M., Punta, M., Vierlinger, K., Valiente, P. A., Leon, K., Chinea, G., Guirola, O., Bringas, R., Cabrera, G., Guillen, G., … Besada, V. (2013)

In Journal of Proteomics (Vol. 87, pp. 134–138). Elsevier BV

Roosen-Runge, F., Heck, B. S., Zhang, F., Kohlbacher, O., & Schreiber, F. (2013)

In The Journal of Physical Chemistry B (Vol. 117, Issue 18, pp. 5777–5787). American Chemical Society (ACS)

Schubert, B., Lund, O., & Nielsen, M. (2013)

In Tissue Antigens (Vol. 82, Issue 4, pp. 243–251). Wiley

Thiel, P., Röglin, L., Meissner, N., Hennig, S., Kohlbacher, O., & Ottmann, C. (2013)

In Chemical Communications (Vol. 49, Issue 76, p. 8468). Royal Society of Chemistry (RSC)

Walzer, M., Qi, D., Mayer, G., Uszkoreit, J., Eisenacher, M., Sachsenberg, T., Gonzalez-Galarza, F. F., Fan, J., Bessant, C., Deutsch, E. W., Reisinger, F., Vizcaíno, J. A., Medina-Aunon, J. A., Albar, J. P., Kohlbacher, O., & Jones, A. R. (2013)

In Molecular & Cellular Proteomics (Vol. 12, Issue 8, pp. 2332–2340). Elsevier BV

Ziller, M. J., Gu, H., Müller, F., Donaghey, J., Tsai, L. T.-Y., Kohlbacher, O., De Jager, P. L., Rosen, E. D., Bennett, D. A., Bernstein, B. E., Gnirke, A., & Meissner, A. (2013)

In Nature (Vol. 500, Issue 7463, pp. 477–481). Springer Science and Business Media LLC

Ahrends, R., Lichtner, B., Buck, F., Hildebrand, D., Kotasinska, M., Kohlbacher, O., Kwiatkowski, M., Wagner, M., Trusch, M., & Schlüter, H. (2012)

In Journal of Chromatography B (Vol. 901, pp. 34–40). Elsevier BV

Feldhahn, M., Dönnes, P., Schubert, B., Schilbach, K., Rammensee, H.-G., & Kohlbacher, O. (2012)

In Journal of Immunological Methods (Vol. 386, Issues 1–2, pp. 94–100). Elsevier BV

Junker, J., Bielow, C., Bertsch, A., Sturm, M., Reinert, K., & Kohlbacher, O. (2012)

In Journal of Proteome Research (Vol. 11, Issue 7, pp. 3914–3920). American Chemical Society (ACS)

Nahnsen, S., & Kohlbacher, O. (2012)

In BMC Bioinformatics (Vol. 13, Issue S16). Springer Science and Business Media LLC

Röglin, L., Thiel, P., Kohlbacher, O., & Ottmann, C. (2012)

In Proceedings of the National Academy of Sciences (Vol. 109, Issue 18). Proceedings of the National Academy of Sciences